U.S. JGOFS Synthesis & Modeling Project


Preprint Submission:
Please use the PREPRINT FORM to submit your preprint information

Preprint Access: submitted  in press  2003  2002  2001  2000  1999

1st SMP Special Issue in DSR II
Links to Existing Preprint Servers


Lima ID; Doney SC (submitted) A three-dimensional, multi-nutrient, size-structured ecosystem model for the North Atlantic. Global Biogeochemical Cycles : .ABST LINK

in press

Doney SC; Lindsay K; Moore JK. (in press) Global Ocean Carbon Cycling, in: M.J.R. Fasham, J. Field, T. Platt, and B. Zeitzschel (eds.), Ocean Biogeochemistry: A JGOFS Synthesis, Springer Verlag, , vol. , pp. .ABST LINK


Chai F; Jiang M; Barber RT; Dugdale RC; Chao Y (2003) Interdecadal variation in the transition zone chlorophyll front, a physical-biological model simulation between 1960 and 1990 Journal of Oceanography 59(4): 461-475. : ABST LINK
Doney SC; Glover DM; McCue SJ; Fuentes M (2003) Mesoscale variability of SeaWiFS Satellite Ocean Color. Global patterns and spatial scales. J. Geophys. Res. 108(C2): 3024, doi:10.1029/2001JC000843.ABST LINK
Lierheimer LJ; Banse K (2003) Seasonal and interannual variability of phytoplankton pigment in the Laccadive (Lakshadweep) Sea as observed by the Coastal Zone Color Scanner. Proc. Indian Acad. Sci. (Earth Planet. Sci.) 111(2): 163-185 .ABST


Chai F; Dugdale RC; Peng T-H; Wilkerson FP; Barber RT (2002) One Dimensional Ecosystem Model of the Equatorial Pacific Upwelling System, PartI: Model Development and Silicon and Nitrogen Cycle. Deep-Sea Res. II 49: 2713-2745.ABST
Christian JR; Verschell MA; Murtugudde R; Busalacchi AJ; McClain CR (2002) Biogeochemical modelling of the tropical Pacific Ocean. I. Seasonal and interannual variability. Deep-Sea Res. II 49(1-3): 509-543.ABST LINK
Christian JR; Verschell MA; Murtugudde R; Busalacchi AJ; McClain CR (2002) Biogeochemical modelling of the tropical Pacific Ocean. II. Iron biogeochemistry. Deep-Sea Res. II, 49(1-3): 545-565 .ABST LINK
Doney SC; Hecht MW (2002) Antarctic bottom water formation and deep water chlorofluorocarbon distributions in a global ocean climate model. J. Phys. Oceanogr. 32: 1642-1666.ABST LINK
Dugdale RC; Barber RT; Chai F; Peng T-H; Wilkerson FP (2002) One Dimensional Ecosystem Model of the Equatorial Pacific Upwelling System, Part II: Sensitivity Analysis and Comparison with JGOFS EqPac Data. Deep-Sea Res. II 49: 2747-2768 .ABST
Dugdale RC; Wischmeyer AG; Wilkerson FK; Barber RT; Chai F; Jiang M; Peng T-H (2002) Source of meridional asymmetry of nutrients to the equatorial upwelling ecosystem and modeling of the impact on ocean-atmosphere CO2 flux. Deep-Sea Res. II 49: 2515-2531.ABST
Ianson D; Allen SE (2002) A two-dimensional nitrogen and carbon flux model in a coastal upwelling region. Global Biogeochem. Cycles 16(1): 10.1029/2001GB001451..ABST LINK
Hofmann EE; Friedrichs MAM (2002) Predictive modeling for marine ecosystems. , in: Robinson, A.R.; McCarthy, J.J.; Rothschild B.J. (eds.), The Sea, John Wiley and Sons, Inc., NY, vol. 12, pp. 537-565.ABST
Siegel DA; Maritorena S; Nelson NB; Hansell DA; Lorenzi-Kayser M (2002) Global distribution and dynamics of colored dissolved and detrital organic materials J. Geophys. Res. 107(12) : 3228, doi:10.1029/2001JC000965.ABST
Murtugudde R; Beauchamp J; McClain CR; Lewis M; Busalacchi AJ (2002) Effects of penetrative radiation on the upper tropical ocean circulation. J. Climate 15(5): 470-486.ABST LINK
Lima ID; Olson DB; Doney SC (2002) Intrinsic Dynamics and Stability Properties of Size-Structured Pelagic Ecosystem Models. J. Plankton Res. 24: 533-556.ABST LINK
Lima ID; Olson DB; Doney SC (2002) Biological response to frontal dynamics and mesoscale variability in oligotrophic environments: biological production and community structure. J. Geophys. Res. 107(C8): 10.1029/2000JC000393.ABST LINK
McClain CR; Christian JR; Signorini SR; Lewis MR; Asanuma I; Turk D; Dupouy-Douchement C (2002) Satellite ocean-color observations of the tropical Pacific Ocean. Deep-Sea Res. II 49: 2533-2560.ABST
Moore JK; Doney SC; Kleypas JA; Glover DM; Fung I (2002) An intermediate complexity marine ecosystem model for the global domain. Deep-Sea Res. II 49(1-3): 403-462.ABST LINK
Moore JK; Doney SC; Glover DM; Fung I (2002) Iron cycling and nutrient limitation patters in surface waters of the world ocean. Deep-Sea Res. II 49(1-3): 463-507.ABST LINK
Lee K; Karl DM; Wanninkhof R; Zhang J-Z (2002)  Global estimates of net carbon production in the nitrate-depleted tropical and subtropical oceans.  Geophysical Research Letters  29:  10.1029/2001GL014198.ABST


Doney SC; Glover DM (2001) Ocean process tracers: modelling the ocean carbon system., in: Steele and K. Turekian (ed.), Encyclopedia of Ocean Sciences, Academic Press, London, UK, vol. 4, pp. 1929-1935.ABST
Friedrichs MAM; Hofmann EE (2001) Physical control of biological processes in the central equatorial Pacific Ocean. Deep-Sea Res. I 48 : 1023-1069 .ABST LINK
Friedrichs MAM (2001) A data assimilative marine ecosystem model of the central equatorial Pacific: Numerical twin experiments. J. Mar. Res. 59: 859-894.ABST
Dutkiewicz S; Follows M; Marshall J; Gregg WW (2001) Interannual variability of phytoplankton abundances in the North Atlantic. Deep-Sea Res. II 48(10): 2323-2344 .ABST LINK
Hood RR; Bates NR; Capone DG; Olson DB (2001) Modeling the effect of nitrogen fixation on carbon and nitrogen fluxes at BATS. Deep-Sea Res. II 48(8-9): 1609-1648.ABST LINK
Jackson GA (2001) Effect of coagulation on a model planktonic food web. Deep-Sea Res. I 48(1): 95-123.ABST LINK
Johnson GC; Robbins PE; Hufford GE (2001) Systematic Adjustments of Hydrographic Sections for Internal Consistency. Journal of Atmospheric and Oceanic Technology 18(7) : 1234-1244 .ABST  
McGillicuddy DJ; Kosnyrev VK (2001) Dynamical interpolation of mesoscale flows in the Topex/Poseidon diamond surrounding the U.S. JGOFS Bermuda Atlantic Time-series Site. J. Geophys. Res. 106(C8): 16,641-16,656. : .ABST LINK
McGillicuddy DJ; Kosnyrev VK; Ryan JP; Yoder JA (2001) Covariation of mesoscale ocean color and sea surface temperature patterns in the Sargasso Sea. Deep-Sea Res. II 48(8-9): 1823-1836.ABST LINK
Ono S; Ennyu A; Najjar RG; Bates N (2001) Shallow remineralization in the Sargasso Sea estimated from seasonal variations in oxygen, dissolved inorganic carbon and nitrate. Deep-Sea Res. II 48(8-9): 1567-1582.ABST LINK
Siegel DA; et al. (2001) Bio-optical modeling of primary production on regional scales: The Bermuda BioOptics Project Deep-Sea Res. II 48(8-9): 1865-1896 .ABST LINK
Signorini SR; McClain CR; Christian JR; Wong CS (2001) Seasonal and interannual variability of phytoplankton, nutrients, TCO2, pCO2, and O2 in the esthern subarctic Pacific (ocean weather station Papa) J. Geophys. Res.J. Geophys. Res.J. Geophys. Res. 106(C12): 31,197-31,215 .ABST
 Lee K. (2001)  Global Net Community Production Estimated from the Annual Cycle of Surface Water Total Dissolved Inorganic Carbon  Limnology and Oceanogrphy 46 :  1287-1297.ABST


Caldeira K; Duffy PB (2000) The role of the Southern Ocean in uptake and storage of anthropogenic carbon dioxide. Science 287(5453): 620-622.ABST LINK
Lee K; Millero FJ; Byrne RH; Feely RA; Wanninkhof R (2000) The recommended dissociation constants of carbonic acid in seawater. Geophys. Res. Lett. 27: 229-232.ABST
Lee K; Wanninkhof RH; Feely RA; Millero FJ; Peng T-H (2000) Global relationships of total inorganic carbon with temperature and nitrate in surface water. Global Biogeochem. Cycles 14(30) : 979-994.ABST
Loukos H; Vivier F; Murphy PP; Harrison DE; Le Quéré C (2000) Interannual Variability of Equatorial Pacific CO2 Fluxes Estimated from Temperature and Salinity Data. Geophys. Res. Lett. 27: 1735-1738.ABST LINK


Doney SC (1999) Major challenges confronting marine biogeochemical modeling. Global Biogeochem. Cycles 13: 705-714.ABST LINK
Gnanadesikan A; Toggweiler JR (1999) Constraints placed by silicon cycling on vertical exchange in general circulation models. Geophys. Res. Lett. 26: 1865-1868.ABST LINK


Links to Existing Preprint Servers (of relevance to SMP)

Bob Key's list of Data Reports and References from the WOCE Radiocarbon Program, which includes:
(1) list of publications and reports
(2) direct access to text of final data reports for various WOCE legs
(3) copies of grey literature reports.